Software
- How can I convert the feature-barcode matrix from Cell Ranger 3.x to a CSV file?
- How can I convert the gene-barcode matrix from Cell Ranger 1.x and 2.x to a CSV file?
- How do I get the read counts for each barcode?
- How to view aggregated .cloupe file by library?
- How can the percentage of reads aligned to "Exonic Regions" be greater than those aligned to the "Transcriptome"?
- What to do if I sequenced more bases than required on the R1, R2, or the index read for 3' single-cell data?