Software
- How do you integrate multiple samples for Xenium analysis?
- How can I convert coordinates between H&E image and Xenium data?
- Why is Xenium Explorer telling me it “Cannot open required files”?
- XOA v3.2 datasets do not require batch correction to be analyzed with previous XOA v3 datasets
- Xenium Multimodal Cell Segmentation on muscle
- Import annotations into Xenium Explorer
- Boundary stain shows cell morphology better than the interior stain
- Brain fraction of transcripts within cells is low
- Rescue Xenium transcripts outside cells
- How can I ensure each cell has a high-quality transcript when importing third-party segmentation for Xenium Ranger?
- How XA v2 pipeline changes impact data comparability
- Is Xenium data usable despite a few high NCPs?
- What is the Xenium ‘Negative control probe counts per control per cell’ metric?
- What are the Xenium image scale factors?
- How does Xenium perform cell segmentation?