Question: What fraction of mRNA transcripts are captured per cell?
Answer: Depending on the Single Cell 3' reagent chemistry (v1 or v2), approximately 6.7-8.1% (v1) or 14-15% (v2) of mRNA transcripts are captured per cell.
For more information on how this was calculated for Single Cell 3' v1, please see Zheng et al. 2017 (Supplementary Figure 2, https://www.nature.com/articles/ncomms14049)
Products: Single Cell 3'