Question: Can cells be stained with dyes such as propidium iodide (PI) or Hoechst dyes?
Answer: We have not tested this internally. However, dyes such as PI or Hoechst are commonly used in single cell RNA-seq projects and are not expected to interfere with the 10x Single Cell workflow. We have customers successfully use these stains for FACS upstream of the 10x Single Cell workflow.
Products: Single Cell 3', VDJ