Question: Is the Sample Index plate compatible across products?
Answer: Several different index plates exist for 10x assays. These index plates differ based on whether they are single index or dual index, and based on the specific Illumina Read 1 and Read2 adapter sequence that they contain. It is essential to follow the User Guide to select the appropriate index plate based on the assay, library type and version.
The names and part numbers for the sample index plates associated with each product can be found here:
- Spatial Gene Expression Libraries
- Single Cell 3' Libraries
- Single Cell Immune Profiling Libraries
- Single Cell ATAC Libraries
- Genome/Exome Libraires
- Single Cell DNA
Products: Single Cell Gene Expression, Single Cell Immune Profiling, Single Cell ATAC, Genome/Exome, Single Cell CNV, Visium